BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032B06LP1|AL429517
(892 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1674 1720 0.0
>3x_Contig1674
Length = 12281
Score = 1720 bits (865), Expect = 0.0
Identities = 885/893 (99%), Gaps = 1/893 (0%)
Strand = Plus / Plus
Query: 1 gatccaaagagaaacatgtatgcatgtgtcagtggtttcatggaccccagtgaaac-gtc 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1774 gatccaaagagaaacatgtatgcatgtgtcagtggtttcatggaccccagtgaaaccgtc 1833
Query: 60 gagaatgcggtactaagggaggtatgggaagagactggattggatgtattgcacgttgat 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1834 gagaatgcggtactaagggaggtatgggaagagactggattggatgtattgcacgttgat 1893
Query: 120 tatgtaactacccagccttggcccttcacaaacaacattatgatcgggtgcctagcagtg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1894 tatgtaactacccagccttggcccttcacaaacaacattatgatcgggtgcctagcagtg 1953
Query: 180 gtggataaagcacaacaggtggatcttggcaacgatgacgagttaatggatgcaaaatgg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1954 gtggataaagcacaacaggtggatcttggcaacgatgacgagttaatggatgcaaaatgg 2013
Query: 240 ttcgccaaggacgatgttaggcgaatgctcgactccggaatggattcctacggtttacta 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2014 ttcgccaaggacgatgttaggcgaatgctcgactccggaatggattcctacggtttacta 2073
Query: 300 agagaccccgtaacagggattggtttacccaacgataagacaattgcaaaccgtctcatc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2074 agagaccccgtaacagggattggtttacccaacgataagacaattgcaaaccgtctcatc 2133
Query: 360 agagcatgtgtataagttatataatggactaattatgagccgttatatattgcccattct 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2134 agagcatgtgtataagttatataatggactaattatgagccgttatatattgcccattct 2193
Query: 420 aaacagttaatattctcaatctatttcccgaatgttccctgttccttcagctgacgtttt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2194 aaacagttaatattctcaatctatttcccgaatgttccctgttccttcagctgacgtttt 2253
Query: 480 taaaatatcgtagaaaatcctccgagaattgtatacacaatccgcattcataactcagat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2254 taaaatatcgtagaaaatcctccgagaattgtatacacaatccgcattcataactcagat 2313
Query: 540 cggaatacctcatataactgctgctccttgtcccttcacactcacttttggttttacatg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2314 cggaatacctcatataactgctgctccttgtcccttcacactcacttttggttttacatg 2373
Query: 600 ttattacgatttacttcgtacaacttcatggaattttactagtaaaatgtccatccggat 659
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2374 taattacgatttacttcgtacaacttcatggaattttactagtaaaatgtccatccggat 2433
Query: 660 ttgagttaaataaagaacaaaaaagggtataaattcagctggaaaaggctaagaaggtga 719
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2434 ttgagtcaaataaagaacaaaaaagggtataaattcagctggaaaaggctaagaaggtga 2493
Query: 720 caatgacacaagtwccaattatacagtctagaaggttcactgttagcgactygaaacaat 779
||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 2494 caatgacacaagtaccaattatacagtctagaaggttcactgtaagcgactcgaaacaat 2553
Query: 780 aatcaaaatgacaacaagcaaaatgttacaagtgattkgacatagaggatttaaagccaa 839
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2554 aatcaaaatgacaacaagcaaaatgttacaagtgattggacatagaggatttaaagccaa 2613
Query: 840 gtacccagagaatacattactatkttacgagaaagcacatgaagcgggatcgg 892
||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2614 gtacccagagaatacattactatgttacgagaaagcacatgaagcgggatcgg 2666
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4869
Number of Sequences: 1807
Number of extensions: 4869
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 1
length of query: 892
length of database: 10,358,551
effective HSP length: 16
effective length of query: 876
effective length of database: 10,329,639
effective search space: 9048763764
effective search space used: 9048763764
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)